Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein yhes | FLACOL_01476 | Not Available | Positive | 1715829 - 1717739 | 72959.4 |
| hypothetical protein | FLACOL_01477 | Not Available | Negative | 1717803 - 1718912 | 43943.1 |
| hypothetical protein | FLACOL_01478 | Not Available | Negative | 1719365 - 1720738 | 50334.2 |
| regulatory protein asnc | FLACOL_01479 | Not Available | Negative | 1721887 - 1722357 | 17649.5 |
| hypothetical protein | FLACOL_01480 | Not Available | Positive | 1722561 - 1723379 | 30605.1 |
| hypothetical protein | FLACOL_01481 | Not Available | Positive | 1723469 - 1724833 | 53324.0 |
| d-3-phosphoglycerate dehydrogenase | FLACOL_01482 | Not Available | Positive | 1724880 - 1726772 | 70688.3 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | FLACOL_01483 | Not Available | Positive | 1726871 - 1729789 | 108947.0 |
| histidine decarboxylase | FLACOL_01484 | Not Available | Positive | 1730035 - 1731153 | 42060.1 |
| Trna-met | Not Available | Not Available | Positive | 1731242 - 1731317 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
