Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | FLACOL_00102 | Not Available | Positive | 138350 - 141055 | 103157.0 |
| acyl-acp thioesterase | FLACOL_00103 | Not Available | Negative | 141648 - 142388 | 28473.0 |
| trna dimethylallyltransferase | FLACOL_00104 | Not Available | Negative | 142390 - 143319 | 35701.9 |
| virginiamycin a acetyltransferase | FLACOL_00105 | Not Available | Negative | 143329 - 143958 | 23543.2 |
| hypothetical protein | FLACOL_00106 | Not Available | Negative | 144015 - 145376 | 52036.3 |
| hypothetical protein | FLACOL_00107 | Not Available | Negative | 145639 - 146007 | 14196.1 |
| hypothetical protein | FLACOL_00108 | Not Available | Negative | 146044 - 146706 | 24976.5 |
| acyltransferase family protein | FLACOL_00109 | Not Available | Negative | 146708 - 147763 | 41430.9 |
| hypothetical protein | FLACOL_00110 | Not Available | Negative | 147858 - 148178 | 12399.0 |
| hypothetical protein | FLACOL_00111 | Not Available | Negative | 148206 - 149438 | 48209.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
