Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_01246 | Not Available | Positive | 1424402 - 1425358 | 36603.1 |
| n-glycosyltransferase | FLACOL_01247 | Not Available | Positive | 1425358 - 1426467 | 42724.4 |
| hypothetical protein | FLACOL_01248 | Not Available | Negative | 1426472 - 1426948 | 18355.6 |
| hypothetical protein | FLACOL_01249 | Not Available | Positive | 1427005 - 1427502 | 17959.8 |
| ferric enterobactin receptor precursor | FLACOL_01250 | Not Available | Negative | 1427794 - 1430541 | 100963.0 |
| glucose-6-phosphate isomerase | FLACOL_01251 | Not Available | Negative | 1430717 - 1432357 | 62609.1 |
| tryptophan 2,3-dioxygenase | FLACOL_01252 | Not Available | Negative | 1432432 - 1433355 | 37261.1 |
| hypothetical protein | FLACOL_01253 | Not Available | Negative | 1433360 - 1434142 | 30044.1 |
| tryptophan--trna ligase | FLACOL_01254 | Not Available | Negative | 1434457 - 1435428 | 36319.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | FLACOL_01255 | Not Available | Positive | 1435500 - 1436258 | 29505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
