Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | FLACOL_00082 | Not Available | Positive | 117148 - 118125 | 37003.0 |
| hypothetical protein | FLACOL_00083 | Not Available | Positive | 118142 - 118492 | 13342.7 |
| hypothetical protein | FLACOL_00084 | Not Available | Positive | 118569 - 119243 | 25953.5 |
| hypothetical protein | FLACOL_00085 | Not Available | Positive | 119264 - 119947 | 25328.8 |
| hypothetical protein | FLACOL_00086 | Not Available | Positive | 119974 - 120513 | 19896.5 |
| hypothetical protein | FLACOL_00087 | Not Available | Positive | 120503 - 120751 | 9312.63 |
| hypothetical protein | FLACOL_00088 | Not Available | Negative | 120795 - 122192 | 53369.6 |
| outer membrane protein tolc precursor | FLACOL_00089 | Not Available | Positive | 122302 - 123729 | 53349.3 |
| macrolide export protein maca | FLACOL_00090 | Not Available | Positive | 123820 - 125130 | 48230.0 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | FLACOL_00091 | Not Available | Positive | 125248 - 125910 | 24776.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
