Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00072 | Not Available | Positive | 100633 - 101976 | 52108.5 |
| hth-type transcriptional regulator immr | FLACOL_00073 | Not Available | Positive | 106472 - 106807 | 12728.5 |
| tyrosine recombinase xerc | FLACOL_00074 | Not Available | Negative | 106875 - 107798 | 35761.1 |
| hypothetical protein | FLACOL_00075 | Not Available | Negative | 109888 - 110148 | 9094.17 |
| plasmid stabilization system protein | FLACOL_00076 | Not Available | Negative | 111628 - 111930 | 11947.6 |
| hypothetical protein | FLACOL_00077 | Not Available | Negative | 111927 - 112157 | 8996.54 |
| hth-type transcriptional regulator immr | FLACOL_00078 | Not Available | Negative | 112167 - 112514 | 13216.8 |
| hypothetical protein | FLACOL_00079 | Not Available | Positive | 113685 - 113936 | 8683.0 |
| protoheme ix farnesyltransferase | FLACOL_00080 | Not Available | Positive | 115663 - 116526 | 31977.8 |
| cytochrome c oxidase subunit 3 | FLACOL_00081 | Not Available | Positive | 116526 - 117104 | 22355.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
