Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavoredoxin | FLACOL_00062 | Not Available | Negative | 88866 - 89738 | 31912.6 |
| sporulation kinase a | FLACOL_00063 | Not Available | Positive | 89834 - 90985 | 44559.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | FLACOL_00064 | Not Available | Positive | 90976 - 92088 | 41674.7 |
| penicillin-binding protein 2d | FLACOL_00065 | Not Available | Positive | 92089 - 92838 | 28472.8 |
| putative ctpa-like serine protease | FLACOL_00066 | Not Available | Positive | 92954 - 94591 | 61254.4 |
| hypothetical protein | FLACOL_00067 | Not Available | Positive | 95914 - 96300 | 14417.9 |
| hypothetical protein | FLACOL_00068 | Not Available | Positive | 96683 - 97366 | 25930.5 |
| hypothetical protein | FLACOL_00069 | Not Available | Positive | 97363 - 98073 | 27915.2 |
| hypothetical protein | FLACOL_00070 | Not Available | Positive | 98086 - 98472 | 14950.8 |
| phage-related baseplate assembly protein | FLACOL_00071 | Not Available | Positive | 98523 - 100628 | 78594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
