Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainDAU203

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Cellulophaga lytica str. DAU203
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica strain DAU203 chromosome, complete genome.

Gene Summary

Adenine Count

1347310 bp

Thymine Count

1339911 bp

Guanine Count

639190 bp

Cytosine Count

626546 bp

Genome Length

3952957 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ankyrin repeat domain-containing proteinA5M85_RS03245Not AvailableNegative723455 - 72383813350.5
nadh:ubiquinone reductase (na(+)-transporting) subunit fA5M85_RS03250Not AvailableNegative724062 - 72536948707.4
nadh:ubiquinone reductase (na(+)-transporting) subunit eA5M85_RS03255Not AvailableNegative725372 - 72610626594.8
nadh:ubiquinone reductase (na(+)-transporting) subunit dA5M85_RS03260Not AvailableNegative726134 - 72679623550.8
na(+)-translocating nadh-quinone reductase subunit cA5M85_RS03265Not AvailableNegative726800 - 72754927417.0
nadh:ubiquinone reductase (na(+)-transporting) subunit bA5M85_RS03270Not AvailableNegative727570 - 72877243960.1
na(+)-translocating nadh-quinone reductase subunit aA5M85_RS03275Not AvailableNegative728776 - 73012548978.1
type ix secretion system plug protein domain-containing proteinA5M85_RS03280Not AvailablePositive730309 - 73155348190.5
co2+/mg2+ efflux protein apagA5M85_RS03285Not AvailablePositive731810 - 73219614406.2
l-glutamate gamma-semialdehyde dehydrogenaseA5M85_RS03290Not AvailablePositive732289 - 73391759632.5

Displaying genes 651 – 660 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.