Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainDAU203

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Cellulophaga lytica str. DAU203
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica strain DAU203 chromosome, complete genome.

Gene Summary

Adenine Count

1347310 bp

Thymine Count

1339911 bp

Guanine Count

639190 bp

Cytosine Count

626546 bp

Genome Length

3952957 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
citrate synthaseA5M85_RS11450Not AvailablePositive2560877 - 256216047790.4
dimethylarginine dimethylaminohydrolase family proteinA5M85_RS11455Not AvailablePositive2562282 - 256319334983.7
citrulline utilization hydrolase ctlxA5M85_RS11460Not AvailablePositive2563210 - 256414235109.7
arginine--trna ligaseA5M85_RS11465Not AvailablePositive2564202 - 256597467075.2
zinc-dependent peptidaseA5M85_RS11470Not AvailablePositive2565993 - 256680531261.8
carboxypeptidase-like regulatory domain-containing proteinA5M85_RS11475Not AvailableNegative2566802 - 256933696363.5
fecr family proteinA5M85_RS11480Not AvailableNegative2569323 - 257023134402.9
rna polymerase sigma factorA5M85_RS11485Not AvailableNegative2570326 - 257083819912.8
hypothetical proteinA5M85_RS11490Not AvailablePositive2570953 - 257267164636.9
signal recognition particle proteinA5M85_RS11495Not AvailablePositive2572806 - 257414648653.7

Displaying genes 2301 – 2310 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.