Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainDAU203

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Cellulophaga lytica str. DAU203
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica strain DAU203 chromosome, complete genome.

Gene Summary

Adenine Count

1347310 bp

Thymine Count

1339911 bp

Guanine Count

639190 bp

Cytosine Count

626546 bp

Genome Length

3952957 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane beta-barrel proteinA5M85_RS10805Not AvailablePositive2425041 - 242590131239.8
glucosamine-6-phosphate deaminaseA5M85_RS10810Not AvailablePositive2426294 - 242822271813.7
universal stress proteinA5M85_RS10815Not AvailableNegative2428284 - 242912631835.9
crp/fnr family transcriptional regulatorA5M85_RS10820Not AvailableNegative2429251 - 242993725422.7
heavy metal translocating p-type atpaseA5M85_RS10825Not AvailablePositive2430055 - 243243088477.1
alginate export family proteinA5M85_RS10830Not AvailableNegative2432489 - 243374847217.9
cbb3-type cytochrome oxidase assembly protein ccosA5M85_RS10835Not AvailablePositive2433931 - 24341317601.33
cytochrome-c oxidase, cbb3-type subunit iA5M85_RS10840Not AvailablePositive2434135 - 243633383216.5
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneA5M85_RS10845Not AvailablePositive2436338 - 24365297458.23
cbb3-type cytochrome c oxidase n-terminal domain-containing proteinA5M85_RS10850Not AvailablePositive2436537 - 243742433359.1

Displaying genes 2171 – 2180 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.