Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainDAU203

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Cellulophaga lytica str. DAU203
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica strain DAU203 chromosome, complete genome.

Gene Summary

Adenine Count

1347310 bp

Thymine Count

1339911 bp

Guanine Count

639190 bp

Cytosine Count

626546 bp

Genome Length

3952957 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional aspartate kinase/homoserine dehydrogenase iA5M85_RS10405Not AvailablePositive2335221 - 2338604123656.0
trans-sulfuration enzyme family proteinA5M85_RS10410Not AvailablePositive2338729 - 233989242381.5
rrf2 family transcriptional regulatorA5M85_RS10415Not AvailablePositive2340003 - 234041015114.7
duf2061 domain-containing proteinA5M85_RS10420Not AvailablePositive2340623 - 234088610056.4
phosphoadenosine phosphosulfate reductase family proteinA5M85_RS10425Not AvailablePositive2340905 - 234152823714.3
sulfate adenylyltransferase subunit cysdA5M85_RS10430Not AvailablePositive2341581 - 234251935913.6
sulfate adenylyltransferase subunit 1A5M85_RS10435Not AvailablePositive2342631 - 234387845932.3
hepn domain-containing proteinA5M85_RS10440Not AvailablePositive2343983 - 234607377917.0
uroporphyrinogen-iii c-methyltransferaseA5M85_RS10445Not AvailablePositive2346078 - 234686027821.7
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelataseA5M85_RS10450Not AvailablePositive2346924 - 234751122067.5

Displaying genes 2091 – 2100 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.