Cellulophaga lytica str. DAU203

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga lytica strain DAU203 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and exhibits optimal growth at a temperature of 25.0°C. This strain is characterized as a heterotrophic chemotroph, indicating its reliance on organic compounds as an energy source, which it metabolizes through chemical means. Cellulophaga lytica is notable for its role in the degradation of complex organic materials, particularly in environments where cellulose is abundant. This trait suggests its potential utility in biotechnological applications focused on waste management and biofuel production, where efficient breakdown of plant materials is crucial. Moreover, the bacterium's aerobic metabolism may influence its ecological interactions, particularly in oxygen-rich environments where it can outcompete other microbes for organic substrates. The specific growth temperature of 25.0°C aligns with its potential isolation from temperate environments, where it may play an essential role in nutrient cycling. Understanding the metabolic pathways and ecological niches of Cellulophaga lytica strain DAU203 could provide valuable insights into microbial community dynamics and the decomposition processes in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga lytica
StrainDAU203

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Cellulophaga lytica str. DAU203
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph; chemotroph
PathogenicityNot Available

Genome Summary

Cellulophaga lytica strain DAU203 chromosome, complete genome.

Gene Summary

Adenine Count

1347310 bp

Thymine Count

1339911 bp

Guanine Count

639190 bp

Cytosine Count

626546 bp

Genome Length

3952957 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s6--l-glutamate ligaseA5M85_RS06325Not AvailablePositive1385954 - 138734551170.8
cyth domain-containing proteinA5M85_RS06330Not AvailableNegative1387394 - 138786718111.3
nad-dependent epimerase/dehydratase family proteinA5M85_RS06335Not AvailableNegative1387867 - 138853524613.0
dna polymerase ivA5M85_RS06340Not AvailablePositive1388563 - 138966041328.2
peroxiredoxinA5M85_RS06345Not AvailablePositive1389762 - 139040023393.7
sensor histidine kinaseA5M85_RS06350Not AvailablePositive1390495 - 139158640969.9
sigma-54-dependent transcriptional regulatorA5M85_RS06355Not AvailablePositive1391590 - 139291249966.4
glu/leu/phe/val family dehydrogenaseA5M85_RS06360Not AvailablePositive1393381 - 139466447241.6
grea/greb family elongation factorA5M85_RS06365Not AvailablePositive1394679 - 139509815644.0
hypothetical proteinA5M85_RS06370Not AvailablePositive1395095 - 139548115407.5

Displaying genes 1271 – 1280 of 3486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.