Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae str. AU13965
Accession NumberNZ_CP034395.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EJD96_RS00385 | Not Available | - | 28324 - 28593 | 10324.3 |
| duf445 domain-containing protein | EJD96_RS00390 | Not Available | + | 28857 - 30134 | 47793.2 |
| acyl-coa synthetase | EJD96_RS00395 | Not Available | - | 30154 - 31797 | 59292.0 |
| ob-fold protein | EJD96_RS00400 | Not Available | + | 32007 - 32486 | 16738.5 |
| conjugative transfer signal peptidase traf | EJD96_RS00405 | Not Available | - | 32600 - 33136 | 19392.4 |
| esterase/lipase family protein | EJD96_RS00415 | Not Available | + | 34157 - 35875 | 63427.9 |
| t6ss immunity protein tli4 family protein | EJD96_RS24010 | Not Available | + | 35884 - 37590 | 63694.5 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS24450 | Not Available | + | 37734 - 38660 | 34507.8 |
| paar domain-containing protein | EJD96_RS00430 | Not Available | + | 38712 - 38978 | 9033.66 |
| methyl-accepting chemotaxis protein | EJD96_RS00435 | Not Available | - | 39021 - 40625 | 56761.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.