Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aahs family 4-hydroxybenzoate transporter-like mfs transporter | DFO49_0928 | Not Available | Negative | 1004143 - 1005474 | 46590.2 |
| lysr family transcriptional regulator | DFO49_0929 | Not Available | Negative | 1005719 - 1006924 | 43632.2 |
| 4-oxalomesaconate tautomerase | DFO49_0930 | Not Available | Positive | 1007055 - 1008215 | 40429.8 |
| 4-oxalomesaconate hydratase | DFO49_0931 | Not Available | Positive | 1008221 - 1009264 | 38910.5 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase | DFO49_0932 | Not Available | Positive | 1009261 - 1009959 | 24434.8 |
| putative porin | DFO49_0933 | Not Available | Positive | 1010151 - 1011272 | 39885.5 |
| tetr family transcriptional regulator | DFO49_0934 | Not Available | Negative | 1011285 - 1011896 | 22276.4 |
| membrane fusion protein (multidrug efflux system) | DFO49_0935 | Not Available | Positive | 1012040 - 1013218 | 41071.9 |
| hae1 family hydrophobic/amphiphilic exporter-1/multidrug efflux pump | DFO49_0936 | Not Available | Positive | 1013235 - 1016384 | 112080.0 |
| multidrug efflux system outer membrane protein | DFO49_0937 | Not Available | Positive | 1016386 - 1017888 | 53355.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


