Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system permease protein | DFO49_0918 | Not Available | Positive | 990637 - 991671 | 36962.0 |
| amino acid/amide abc transporter membrane protein 2 (haat family) /amino acid/amide abc transporter atp-binding protein 1 (haat family) | DFO49_0919 | Not Available | Positive | 991668 - 993575 | 67615.9 |
| amino acid/amide abc transporter atp-binding protein 2 (haat family) | DFO49_0920 | Not Available | Positive | 993565 - 994314 | 27356.5 |
| ketopantoate reductase | DFO49_0921 | Not Available | Positive | 994314 - 995402 | 38883.1 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | DFO49_0922 | Not Available | Positive | 995441 - 996217 | 29118.9 |
| hypothetical protein | DFO49_0923 | Not Available | Negative | 996330 - 996938 | 23308.9 |
| hypothetical protein | DFO49_0924 | Not Available | Negative | 997025 - 997375 | 13774.6 |
| putative chitinase | DFO49_0925 | Not Available | Negative | 997630 - 999882 | 83937.4 |
| type vi secretion system secreted protein vgrg | DFO49_0926 | Not Available | Negative | 999905 - 1002403 | 92737.1 |
| protocatechuate 4,5-dioxygenase alpha subunit /protocatechuate 4,5-dioxygenase beta subunit | DFO49_0927 | Not Available | Negative | 1002782 - 1004089 | 48453.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


