Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase small subunit | DFO49_0908 | Not Available | Negative | 979336 - 979845 | 19136.0 |
| phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase large terminal subunit | DFO49_0909 | Not Available | Negative | 979842 - 981128 | 48500.4 |
| amidase | DFO49_0910 | Not Available | Negative | 981195 - 982361 | 39251.9 |
| lysr family transcriptional regulator | DFO49_0911 | Not Available | Positive | 982699 - 983628 | 34843.2 |
| putative porin | DFO49_0912 | Not Available | Negative | 983739 - 984797 | 36424.8 |
| pas/pac sensor signal transduction histidine kinase | DFO49_0913 | Not Available | Negative | 985137 - 986678 | 57834.7 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | DFO49_0914 | Not Available | Positive | 986904 - 988064 | 40998.4 |
| hypothetical protein | DFO49_0915 | Not Available | Positive | 988116 - 988487 | 13607.5 |
| 3-oxoacyl-[acyl-carrier protein] reductase | DFO49_0916 | Not Available | Positive | 988490 - 989233 | 25371.8 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFO49_0917 | Not Available | Positive | 989329 - 990504 | 41115.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


