Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconate cycloisomerase | DFO49_0888 | Not Available | Positive | 959038 - 960240 | 42442.4 |
| catechol 1,2-dioxygenase | DFO49_0889 | Not Available | Positive | 960291 - 961226 | 33674.9 |
| benzoate 1,2-dioxygenase alpha subunit | DFO49_0890 | Not Available | Positive | 961339 - 962712 | 51939.0 |
| benzoate/toluate 1,2-dioxygenase beta subunit | DFO49_0891 | Not Available | Positive | 962709 - 963203 | 19544.8 |
| benzoate/toluate 1,2-dioxygenase reductase subunit | DFO49_0892 | Not Available | Positive | 963225 - 964250 | 36089.3 |
| dihydroxycyclohexadiene carboxylate dehydrogenase | DFO49_0893 | Not Available | Positive | 964247 - 965035 | 27480.1 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | DFO49_0894 | Not Available | Positive | 965070 - 965480 | 15005.3 |
| aahs family benzoate transporter-like mfs transporter | DFO49_0895 | Not Available | Positive | 965579 - 966946 | 48174.4 |
| benzoate membrane transport protein | DFO49_0896 | Not Available | Positive | 967046 - 968215 | 40445.7 |
| 50s ribosome-binding gtpase | DFO49_0897 | Not Available | Positive | 968235 - 969506 | 46980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


