Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase algf | DFO49_0878 | Not Available | Positive | 947722 - 948390 | 22820.7 |
| alginate o-acetyltransferase complex protein algi | DFO49_0879 | Not Available | Positive | 948437 - 949867 | 53858.1 |
| alginate o-acetyltransferase complex protein algj | DFO49_0880 | Not Available | Positive | 949926 - 951038 | 39074.5 |
| hypothetical protein | DFO49_0881 | Not Available | Positive | 951239 - 952576 | 48294.3 |
| hypothetical protein | DFO49_0882 | Not Available | Positive | 952569 - 953294 | 26135.0 |
| recf/recn/smc family protein | DFO49_0883 | Not Available | Positive | 953294 - 956107 | 105788.0 |
| hypothetical protein | DFO49_0884 | Not Available | Negative | 956167 - 956460 | 11085.3 |
| 3-oxoadipate enol-lactonase | DFO49_0885 | Not Available | Negative | 956572 - 957357 | 27949.4 |
| muconolactone delta-isomerase | DFO49_0886 | Not Available | Negative | 957435 - 957722 | 10756.1 |
| dna-binding transcriptional lysr family regulator | DFO49_0887 | Not Available | Negative | 957949 - 958902 | 35920.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


