Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | DFO49_0037 | Not Available | Positive | 35148 - 36047 | 30950.2 |
| ornithine cyclodeaminase | DFO49_0038 | Not Available | Negative | 36122 - 37042 | 32021.6 |
| dna-binding transcriptional lysr family regulator | DFO49_0039 | Not Available | Negative | 37076 - 38014 | 34837.0 |
| dna methylase | DFO49_0040 | Not Available | Negative | 38220 - 39374 | 42191.6 |
| hypothetical protein | DFO49_0041 | Not Available | Negative | 39374 - 40555 | 43063.7 |
| bifunctional nmn adenylyltransferase/nudix hydrolase | DFO49_0042 | Not Available | Negative | 40560 - 41609 | 39669.2 |
| nad+ synthase (glutamine-hydrolysing) | DFO49_0043 | Not Available | Negative | 41694 - 43391 | 60982.2 |
| nicotinate phosphoribosyltransferase | DFO49_0044 | Not Available | Negative | 43420 - 44622 | 45597.7 |
| hypothetical protein | DFO49_0045 | Not Available | Negative | 44651 - 45514 | 30950.6 |
| 8-oxo-dgtp diphosphatase | DFO49_0046 | Not Available | Positive | 45726 - 46388 | 24379.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


