Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | DFO49_0848 | Not Available | Negative | 907193 - 907675 | 18280.1 |
| xre family transcriptional regulator | DFO49_0849 | Not Available | Positive | 907971 - 908672 | 25050.6 |
| amino acid abc transporter substrate-binding protein (paat family) | DFO49_0850 | Not Available | Positive | 909613 - 910422 | 28888.3 |
| amino acid abc transporter membrane protein (paat family) | DFO49_0851 | Not Available | Positive | 910504 - 911160 | 24009.3 |
| amino acid abc transporter atp-binding protein (paat family) | DFO49_0852 | Not Available | Positive | 911168 - 911956 | 29207.6 |
| glycine/d-amino acid oxidase-like deaminating enzyme | DFO49_0853 | Not Available | Positive | 912140 - 913468 | 47948.5 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | DFO49_0854 | Not Available | Positive | 913604 - 915397 | 62920.1 |
| lysr family transcriptional regulator | DFO49_0855 | Not Available | Negative | 915528 - 916439 | 33069.5 |
| l-threonine synthase | DFO49_0856 | Not Available | Positive | 916545 - 917967 | 51979.1 |
| l-threonine aldolase | DFO49_0857 | Not Available | Negative | 918032 - 919096 | 38032.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


