Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0818 | Not Available | Positive | 869845 - 870144 | 10615.1 |
| chromate transporter | DFO49_0819 | Not Available | Negative | 870167 - 871411 | 43343.4 |
| protein translocase subunit yajc | DFO49_0820 | Not Available | Positive | 871683 - 872015 | 11665.6 |
| preprotein translocase subunit secd | DFO49_0821 | Not Available | Positive | 872180 - 874084 | 68263.0 |
| protein translocase subunit secf | DFO49_0822 | Not Available | Positive | 874155 - 875099 | 34700.7 |
| trna a37 threonylcarbamoyladenosine dehydratase | DFO49_0823 | Not Available | Positive | 875233 - 876081 | 30213.2 |
| drug/metabolite transporter (dmt)-like permease | DFO49_0824 | Not Available | Negative | 876100 - 877038 | 33331.4 |
| uncharacterized protein duf4337 | DFO49_0825 | Not Available | Negative | 877194 - 877811 | 21968.6 |
| catalase-peroxidase | DFO49_0826 | Not Available | Positive | 878333 - 880582 | 81436.6 |
| phosphonate degradation associated hdig domain protein | DFO49_0827 | Not Available | Positive | 880748 - 881326 | 21160.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


