Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | DFO49_0027 | Not Available | Negative | 29380 - 29712 | 12386.0 |
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | DFO49_0028 | Not Available | Positive | 29838 - 30926 | 39715.4 |
| hypothetical protein | DFO49_0029 | Not Available | Positive | 31107 - 31259 | 5573.84 |
| immunity protein 52 of polymorphic toxin system | DFO49_0030 | Not Available | Negative | 31374 - 32108 | 26588.7 |
| restriction endonuclease fold toxin 5 of polymorphic toxin system | DFO49_0031 | Not Available | Negative | 32105 - 32689 | 21309.5 |
| hypothetical protein | DFO49_0032 | Not Available | Negative | 32686 - 33048 | 13820.7 |
| uncharacterized protein duf4123 | DFO49_0033 | Not Available | Negative | 33045 - 33539 | 18024.2 |
| putative zn-binding protein involved in type vi secretion | DFO49_0034 | Not Available | Negative | 33539 - 33952 | 13730.3 |
| hypothetical protein | DFO49_0035 | Not Available | Negative | 34159 - 34254 | 3542.67 |
| glutathione s-transferase | DFO49_0036 | Not Available | Negative | 34320 - 34943 | 23193.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


