Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response ompr family regulator | DFO49_0705 | Not Available | Positive | 770436 - 771170 | 27146.5 |
| type vi secretion system protein vasj | DFO49_0706 | Not Available | Positive | 771211 - 772815 | 56137.8 |
| hypothetical protein | DFO49_0707 | Not Available | Positive | 772892 - 773254 | 13163.5 |
| hypothetical protein | DFO49_0708 | Not Available | Negative | 773289 - 774182 | 32698.3 |
| hypothetical protein | DFO49_0709 | Not Available | Positive | 774534 - 774614 | 2988.68 |
| aromatic amino acid lyase | DFO49_0711 | Not Available | Positive | 774615 - 774974 | 13097.6 |
| pkhd-type hydroxylase | DFO49_0712 | Not Available | Negative | 775094 - 775774 | 25610.6 |
| catecholate siderophore receptor | DFO49_0713 | Not Available | Negative | 775920 - 778157 | 80768.0 |
| catecholate siderophore receptor | DFO49_0714 | Not Available | Negative | 778597 - 780876 | 82618.9 |
| nucleoside-specific outer membrane channel protein tsx | DFO49_0715 | Not Available | Negative | 781204 - 782022 | 29936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


