Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impc | DFO49_0685 | Not Available | Positive | 737282 - 738766 | 55448.6 |
| type vi secretion system secreted protein hcp | DFO49_0686 | Not Available | Positive | 739131 - 739619 | 18229.9 |
| type vi secretion system protein | DFO49_0687 | Not Available | Positive | 739654 - 740070 | 15482.5 |
| type vi secretion system protein impg | DFO49_0688 | Not Available | Positive | 740284 - 742008 | 64143.9 |
| type vi secretion system protein imph | DFO49_0689 | Not Available | Positive | 741972 - 742958 | 36583.6 |
| type vi secretion system protein vasg | DFO49_0690 | Not Available | Positive | 743043 - 745682 | 95515.4 |
| type vi secretion system secreted protein vgrg | DFO49_0691 | Not Available | Positive | 745793 - 748525 | 96914.5 |
| uncharacterized protein yjbi with pentapeptide repeats | DFO49_0692 | Not Available | Positive | 748527 - 751226 | 95509.8 |
| uncharacterized protein yjbi with pentapeptide repeats | DFO49_0693 | Not Available | Positive | 751309 - 752319 | 36394.8 |
| uncharacterized protein duf3540 | DFO49_0694 | Not Available | Positive | 752371 - 753033 | 23996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


