Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine 6-phosphate deacetylase | DFO49_0017 | Not Available | Positive | 18217 - 19344 | 39892.0 |
| glutamine--fructose-6-phosphate transaminase | DFO49_0018 | Not Available | Positive | 19307 - 20347 | 36499.3 |
| lysr family transcriptional regulator | DFO49_0019 | Not Available | Negative | 20355 - 21242 | 33142.3 |
| hypothetical protein | DFO49_0020 | Not Available | Positive | 21431 - 21841 | 14707.4 |
| uncharacterized protein duf3300 | DFO49_0021 | Not Available | Positive | 22199 - 23905 | 61711.7 |
| phosphinothricin acetyltransferase | DFO49_0022 | Not Available | Negative | 23988 - 24509 | 19016.8 |
| gluconate 2-dehydrogenase gamma chain | DFO49_0023 | Not Available | Positive | 24948 - 25661 | 25765.8 |
| gluconate 2-dehydrogenase alpha chain | DFO49_0024 | Not Available | Positive | 25715 - 27487 | 65164.3 |
| mono/diheme cytochrome c family protein | DFO49_0025 | Not Available | Positive | 27502 - 28776 | 44943.3 |
| hypothetical protein | DFO49_0026 | Not Available | Positive | 28933 - 29364 | 15466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


