Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had superfamily hydrolase (tigr01509 family) | DFO49_0603 | Not Available | Negative | 668180 - 668827 | 23624.7 |
| cytochrome c-type biogenesis protein ccsb | DFO49_0604 | Not Available | Negative | 668886 - 670040 | 43129.1 |
| cytochrome c biogenesis protein | DFO49_0605 | Not Available | Negative | 670134 - 672299 | 79638.5 |
| cbb3-type cytochrome c oxidase subunit iii | DFO49_0606 | Not Available | Negative | 672577 - 673239 | 23080.4 |
| gtp-binding protein | DFO49_0607 | Not Available | Positive | 673444 - 674193 | 27399.4 |
| porphobilinogen synthase | DFO49_0608 | Not Available | Positive | 674485 - 675504 | 36923.6 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFO49_0609 | Not Available | Negative | 675673 - 676884 | 43555.0 |
| nadp-dependent aldehyde dehydrogenase | DFO49_0610 | Not Available | Negative | 677003 - 678592 | 55270.6 |
| hypothetical protein | DFO49_0611 | Not Available | Negative | 678635 - 678733 | 3400.07 |
| 4-hydroxybutyrate dehydrogenase | DFO49_0612 | Not Available | Negative | 678733 - 679914 | 41164.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


