Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | DFO49_0562 | Not Available | Negative | 629362 - 630126 | 26272.8 |
| acetyl-coa c-acetyltransferase | DFO49_0563 | Not Available | Negative | 630154 - 631407 | 44237.1 |
| trans-feruloyl-coa synthase | DFO49_0564 | Not Available | Negative | 631421 - 633283 | 67921.3 |
| vanillin synthase /trans-feruloyl-coa hydratase | DFO49_0565 | Not Available | Negative | 633438 - 634217 | 27772.5 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFO49_0566 | Not Available | Negative | 634522 - 635697 | 41815.9 |
| hypothetical protein | DFO49_0567 | Not Available | Negative | 635969 - 636226 | 8658.45 |
| putative porin | DFO49_0568 | Not Available | Positive | 636259 - 637374 | 38317.1 |
| iclr family transcriptional regulator | DFO49_0569 | Not Available | Negative | 637519 - 638460 | 33503.4 |
| 3-oxoadipate coa-transferase alpha subunit | DFO49_0570 | Not Available | Positive | 638824 - 639498 | 24031.1 |
| 3-oxoadipate coa-transferase beta subunit | DFO49_0571 | Not Available | Positive | 639495 - 640136 | 22543.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


