Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | DFO49_0008 | Not Available | Negative | 7679 - 8713 | 37706.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 9794 - 9970 | Not Available |
| signal transduction histidine kinase | DFO49_0009 | Not Available | Negative | 8888 - 10459 | 57378.8 |
| dna-binding response ompr family regulator | DFO49_0010 | Not Available | Negative | 10422 - 11135 | 26460.7 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | DFO49_0011 | Not Available | Negative | 11160 - 12497 | 48966.1 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | DFO49_0012 | Not Available | Positive | 12912 - 14219 | 47833.1 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | DFO49_0013 | Not Available | Positive | 14308 - 15222 | 33639.9 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | DFO49_0014 | Not Available | Positive | 15239 - 16150 | 32832.2 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | DFO49_0015 | Not Available | Positive | 16166 - 17299 | 40974.8 |
| glucosamine kinase | DFO49_0016 | Not Available | Positive | 17303 - 18220 | 31494.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


