Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0532 | Not Available | Positive | 593180 - 593905 | 27827.1 |
| hypothetical protein | DFO49_0533 | Not Available | Positive | 594040 - 594984 | 36576.5 |
| formylglycine-generating enzyme required for sulfatase activity | DFO49_0534 | Not Available | Positive | 594962 - 595978 | 37339.0 |
| type vi secretion system protein impa | DFO49_0535 | Not Available | Positive | 596197 - 597324 | 41116.5 |
| oop family ompa-ompf porin | DFO49_0536 | Not Available | Negative | 597417 - 598223 | 28352.8 |
| type vi secretion system protein impm | DFO49_0537 | Not Available | Negative | 598227 - 599213 | 36061.4 |
| type vi secretion system protein impl | DFO49_0538 | Not Available | Negative | 599210 - 603073 | 142231.0 |
| hypothetical protein | DFO49_0539 | Not Available | Negative | 603103 - 604650 | 54811.5 |
| putative zn-binding protein involved in type vi secretion | DFO49_0540 | Not Available | Negative | 604718 - 604975 | 8458.23 |
| peptidoglycan l-alanyl-d-glutamate endopeptidase cwlk | DFO49_0541 | Not Available | Negative | 605044 - 605883 | 31361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


