Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0508 | Not Available | Negative | 563197 - 564621 | 53091.1 |
| type vi secretion system secreted protein vgrg | DFO49_0509 | Not Available | Negative | 564642 - 567575 | 105212.0 |
| type vi secretion system protein impk | DFO49_0510 | Not Available | Negative | 567615 - 568394 | 28690.7 |
| type vi secretion system protein impj | DFO49_0511 | Not Available | Negative | 568391 - 569737 | 50051.9 |
| type vi secretion system protein vasd | DFO49_0512 | Not Available | Negative | 569799 - 570428 | 22452.3 |
| hypothetical protein | DFO49_0513 | Not Available | Positive | 570796 - 571422 | 21408.4 |
| type vi secretion system protein impb | DFO49_0514 | Not Available | Positive | 571514 - 572014 | 18891.7 |
| type vi secretion system protein impc | DFO49_0515 | Not Available | Positive | 572026 - 573519 | 54778.5 |
| type vi secretion system secreted protein hcp | DFO49_0516 | Not Available | Positive | 573554 - 574045 | 17886.2 |
| type vi secretion system protein impf | DFO49_0517 | Not Available | Positive | 574236 - 574724 | 17873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


