Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-hydroxybenzoate 3-monooxygenase | DFO49_0466 | Not Available | Negative | 513236 - 514402 | 43355.6 |
| arac family transcriptional regulator | DFO49_0467 | Not Available | Positive | 514622 - 515533 | 34493.7 |
| iclr family transcriptional regulator | DFO49_0468 | Not Available | Negative | 515609 - 516406 | 28973.5 |
| protocatechuate 3,4-dioxygenase beta subunit | DFO49_0469 | Not Available | Positive | 516657 - 517349 | 26109.1 |
| protocatechuate 3,4-dioxygenase alpha subunit | DFO49_0470 | Not Available | Positive | 517369 - 517881 | 18437.6 |
| 3-carboxy-cis,cis-muconate cycloisomerase | DFO49_0471 | Not Available | Positive | 518250 - 519617 | 48184.5 |
| 3-oxoadipate enol-lactonase | DFO49_0472 | Not Available | Positive | 519670 - 520932 | 45355.2 |
| putative metal-dependent hd superfamily phosphohydrolase | DFO49_0473 | Not Available | Negative | 521285 - 521902 | 24300.6 |
| hypothetical protein | DFO49_0475 | Not Available | Negative | 522137 - 522279 | 4998.03 |
| bacteriophage replication gene a protein | DFO49_0476 | Not Available | Negative | 522276 - 524327 | 76711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


