Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_3125 | Not Available | Positive | 3421834 - 3422187 | 13179.0 |
| Gp15, hypothetical replication protein | DFO49_3126 | Not Available | Positive | 3422177 - 3424228 | 76796.5 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 261 - 3135 | Not Available |
| aromatic amino acid lyase | DFO49_0001 | Not Available | Negative | 1 - 650 | 23068.8 |
| n-carbamoyl-l-amino-acid hydrolase | DFO49_0002 | Not Available | Negative | 690 - 1943 | 44330.2 |
| na+/h+-dicarboxylate symporter | DFO49_0003 | Not Available | Positive | 2110 - 3441 | 46299.4 |
| gntr family transcriptional regulator | DFO49_0004 | Not Available | Positive | 3549 - 4241 | 25096.2 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | DFO49_0005 | Not Available | Positive | 4539 - 6335 | 63015.3 |
| heme oxygenase | DFO49_0006 | Not Available | Positive | 6575 - 7168 | 21265.4 |
| hypothetical protein | DFO49_0007 | Not Available | Positive | 7173 - 7619 | 16630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


