Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa hydroxylase | DFO49_0446 | Not Available | Positive | 492612 - 493475 | 31617.6 |
| methyl-accepting chemotaxis sensory transducer with tarh sensor | DFO49_0447 | Not Available | Negative | 493562 - 495217 | 58200.7 |
| kef-type potassium/proton antiporter (cpa2 family) | DFO49_0448 | Not Available | Negative | 495470 - 497461 | 71045.5 |
| arabinose-5-phosphate isomerase | DFO49_0449 | Not Available | Positive | 497835 - 498863 | 36090.7 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | DFO49_0450 | Not Available | Positive | 498863 - 499417 | 19812.8 |
| lipopolysaccharide export system protein lptc | DFO49_0451 | Not Available | Positive | 499414 - 500022 | 22665.3 |
| lipopolysaccharide export system protein lpta | DFO49_0452 | Not Available | Positive | 500074 - 500700 | 22656.7 |
| lipopolysaccharide export system atp-binding protein | DFO49_0453 | Not Available | Positive | 500703 - 501446 | 27358.3 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | DFO49_0454 | Not Available | Positive | 501585 - 503075 | 55106.8 |
| putative sigma-54 modulation protein | DFO49_0455 | Not Available | Positive | 503228 - 503590 | 13630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


