Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-zinc-cadmium resistance protein czca | DFO49_0352 | Not Available | Positive | 378074 - 381253 | 115392.0 |
| mechanosensitive ion channel-like protein | DFO49_0353 | Not Available | Positive | 381502 - 382089 | 21711.8 |
| uncharacterized protein duf4357 | DFO49_0356 | Not Available | Positive | 383384 - 384292 | 33613.7 |
| type i restriction enzyme r subunit | DFO49_0357 | Not Available | Positive | 384326 - 387541 | 120152.0 |
| hxlr family transcriptional regulator | DFO49_0359 | Not Available | Negative | 387850 - 388296 | 16562.8 |
| putative mfs family arabinose efflux permease | DFO49_0360 | Not Available | Positive | 388392 - 389570 | 41263.3 |
| putative damage-inducible protein dinb | DFO49_0361 | Not Available | Positive | 389646 - 390137 | 18778.2 |
| poly(hydroxyalkanoate) depolymerase family esterase | DFO49_0362 | Not Available | Negative | 390226 - 391296 | 38813.1 |
| short chain enoyl-coa hydratase | DFO49_0364 | Not Available | Negative | 392322 - 393098 | 28113.3 |
| nucleotide-binding universal stress uspa family protein | DFO49_0365 | Not Available | Positive | 393313 - 393750 | 15386.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


