Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gpe familygtail protein | DFO49_3116 | Not Available | Positive | 3414714 - 3414827 | 4257.1 |
| Bacteriophage tail protein gpt | DFO49_3117 | Not Available | Positive | 3414828 - 3417452 | 93728.7 |
| Tail protein | DFO49_3118 | Not Available | Positive | 3417464 - 3418015 | 19683.6 |
| Tail protein | DFO49_3119 | Not Available | Positive | 3418012 - 3419241 | 44867.9 |
| Attr | Not Available | Not Available | Positive | 3419019 - 3419048 | Not Available |
| Hypothetical protein | DFO49_3120 | Not Available | Negative | 3419242 - 3419907 | 24724.7 |
| Helix-turn-helix domain-containing protein | DFO49_3121 | Not Available | Negative | 3420029 - 3420466 | 15366.6 |
| Gp11 | DFO49_3122 | Not Available | Positive | 3420776 - 3420973 | 7277.64 |
| Hypothetical protein | DFO49_3123 | Not Available | Positive | 3421011 - 3421208 | 7329.83 |
| Gp9 | DFO49_3124 | Not Available | Positive | 3421199 - 3421459 | 9487.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


