Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 368666 - 368764 | Not Available |
| putative tim-barrel fold metal-dependent hydrolase | DFO49_0343 | Not Available | Negative | 369864 - 370793 | 33699.5 |
| merr family transcriptional regulator | DFO49_0344 | Not Available | Negative | 371036 - 371413 | 14010.0 |
| pimeloyl-acp methyl ester carboxylesterase | DFO49_0345 | Not Available | Positive | 371504 - 372409 | 32514.0 |
| hypothetical protein | DFO49_0346 | Not Available | Positive | 372595 - 373005 | 14307.6 |
| 4-carboxymuconolactone decarboxylase | DFO49_0347 | Not Available | Positive | 373145 - 373732 | 21859.1 |
| nadph:quinone reductase-like zn-dependent oxidoreductase | DFO49_0348 | Not Available | Negative | 373783 - 374712 | 32605.7 |
| hypothetical protein | DFO49_0349 | Not Available | Positive | 375060 - 375431 | 13258.9 |
| cobalt-zinc-cadmium efflux system outer membrane protein | DFO49_0350 | Not Available | Positive | 375501 - 376787 | 46102.9 |
| cobalt-zinc-cadmium efflux system membrane fusion protein | DFO49_0351 | Not Available | Positive | 376796 - 378046 | 44522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


