Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthraniloyl-coa monooxygenase | DFO49_0311 | Not Available | Positive | 335205 - 337526 | 85634.6 |
| gentisate 1,2-dioxygenase | DFO49_0312 | Not Available | Positive | 337558 - 338697 | 42229.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | DFO49_0313 | Not Available | Positive | 338751 - 339686 | 33595.4 |
| aliphatic nitrilase | DFO49_0314 | Not Available | Positive | 339747 - 340772 | 37039.3 |
| maleate isomerase | DFO49_0315 | Not Available | Positive | 340769 - 341551 | 28203.2 |
| dna-binding marr family transcriptional regulator | DFO49_0316 | Not Available | Positive | 341653 - 342096 | 16572.2 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | DFO49_0317 | Not Available | Negative | 342112 - 342729 | 22439.8 |
| uncharacterized protein (tigr02001 family) | DFO49_0318 | Not Available | Negative | 342871 - 343803 | 32939.3 |
| nitt/taut family transport system substrate-binding protein | DFO49_0319 | Not Available | Negative | 343954 - 345030 | 37954.8 |
| hypothetical protein | DFO49_0321 | Not Available | Positive | 345638 - 345793 | 5845.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


