Herbaspirillum seropedicae str. AG215

SpirillaMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum seropedicae str. AG215 is a Gram-negative, spirilla-shaped bacterium that exhibits motility via true flagella. This organism is classified as aerobic and thrives in mesophilic conditions, making it well-suited for environments with moderate temperature ranges. H. seropedicae str. AG215 is a free-living microbe primarily found in the rhizosphere, the region of soil directly influenced by plant roots. The bacterium possesses a single replicon within its genome, which is accessible via the accession number SOSE00000000.1. This genomic structure supports its metabolic functions and adaptability within its habitat. The relationship of H. seropedicae str. AG215 with the rhizosphere suggests potential interactions with plant roots, which could influence nutrient cycling and microbial community dynamics in the soil ecosystem. Overall, the traits of Herbaspirillum seropedicae str. AG215 highlight its role as a free-living bacterium in the rhizosphere, where it may contribute to the health and functioning of plant-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum seropedicae
StrainAG215

Profile

Physiology
Gram staining propertiesGram-negative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Herbaspirillum seropedicae str. AG215
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatrhizosphere
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

UNVERIFIED_ORG: Herbaspirillum seropedicae strain AG215

Gene Summary

Adenine Count

1082353 bp

Thymine Count

1079353 bp

Guanine Count

1807808 bp

Cytosine Count

1813288 bp

Genome Length

5783094 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anthraniloyl-coa monooxygenaseDFO49_0311Not AvailablePositive335205 - 33752685634.6
gentisate 1,2-dioxygenaseDFO49_0312Not AvailablePositive337558 - 33869742229.7
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayDFO49_0313Not AvailablePositive338751 - 33968633595.4
aliphatic nitrilaseDFO49_0314Not AvailablePositive339747 - 34077237039.3
maleate isomeraseDFO49_0315Not AvailablePositive340769 - 34155128203.2
dna-binding marr family transcriptional regulatorDFO49_0316Not AvailablePositive341653 - 34209616572.2
flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutfDFO49_0317Not AvailableNegative342112 - 34272922439.8
uncharacterized protein (tigr02001 family)DFO49_0318Not AvailableNegative342871 - 34380332939.3
nitt/taut family transport system substrate-binding proteinDFO49_0319Not AvailableNegative343954 - 34503037954.8
hypothetical proteinDFO49_0321Not AvailablePositive345638 - 3457935845.29

Displaying genes 351 – 360 of 5123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.