Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0301 | Not Available | Negative | 322866 - 323777 | 32037.1 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | DFO49_0302 | Not Available | Positive | 324205 - 324993 | 27813.1 |
| flavin-dependent dehydrogenase | DFO49_0303 | Not Available | Positive | 325098 - 326348 | 45537.4 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | DFO49_0304 | Not Available | Positive | 326358 - 326918 | 19679.7 |
| kynurenine formamidase | DFO49_0305 | Not Available | Positive | 326964 - 327761 | 28775.8 |
| phytoene dehydrogenase-like protein | DFO49_0306 | Not Available | Positive | 327766 - 329391 | 57065.5 |
| arac-like dna-binding protein | DFO49_0307 | Not Available | Negative | 329473 - 330498 | 38372.3 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | DFO49_0308 | Not Available | Positive | 330982 - 333186 | 79165.1 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | DFO49_0309 | Not Available | Positive | 333246 - 334754 | 55224.4 |
| 4-hydroxybenzoyl-coa thioesterase | DFO49_0310 | Not Available | Positive | 334765 - 335208 | 16460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


