Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | DFO49_0291 | Not Available | Negative | 311971 - 313002 | 36795.5 |
| lysr family transcriptional regulator | DFO49_0292 | Not Available | Positive | 313231 - 314136 | 33171.7 |
| lysr family transcriptional regulator | DFO49_0293 | Not Available | Negative | 314114 - 315100 | 35439.1 |
| fmn-dependent nadh-azoreductase | DFO49_0294 | Not Available | Positive | 315256 - 315882 | 22296.8 |
| uncharacterized protein ycii | DFO49_0295 | Not Available | Positive | 315896 - 316207 | 10850.2 |
| pimeloyl-acp methyl ester carboxylesterase | DFO49_0296 | Not Available | Positive | 316222 - 317022 | 28902.9 |
| mono/diheme cytochrome c family protein | DFO49_0297 | Not Available | Negative | 317044 - 318492 | 51120.5 |
| gluconate 2-dehydrogenase alpha chain | DFO49_0298 | Not Available | Negative | 318507 - 320288 | 65375.4 |
| gluconate 2-dehydrogenase gamma chain | DFO49_0299 | Not Available | Negative | 320332 - 321039 | 25729.5 |
| methyl-accepting chemotaxis protein | DFO49_0300 | Not Available | Negative | 321182 - 322762 | 56051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


