Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0281 | Not Available | Positive | 302216 - 302752 | 19363.7 |
| lysr family transcriptional regulator | DFO49_0282 | Not Available | Negative | 302756 - 303673 | 33872.4 |
| iron complex outermembrane receptor protein | DFO49_0283 | Not Available | Positive | 303862 - 305937 | 76923.4 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | DFO49_0284 | Not Available | Negative | 305997 - 306368 | 13169.7 |
| thioredoxin reductase | DFO49_0285 | Not Available | Negative | 306421 - 307824 | 49857.8 |
| 2fe-2s iron-sulfur cluster protein | DFO49_0286 | Not Available | Negative | 307821 - 308132 | 10931.3 |
| glycine/d-amino acid oxidase-like deaminating enzyme | DFO49_0287 | Not Available | Negative | 308104 - 309228 | 40695.8 |
| putative spermidine/putrescine transport system permease protein | DFO49_0288 | Not Available | Negative | 309225 - 310025 | 28589.9 |
| putative spermidine/putrescine transport system permease protein | DFO49_0289 | Not Available | Negative | 310022 - 310882 | 30618.7 |
| putative spermidine/putrescine transport system atp-binding protein | DFO49_0290 | Not Available | Negative | 310879 - 311931 | 38267.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


