Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | DFO49_0261 | Not Available | Negative | 280640 - 281431 | 28254.0 |
| xylose abc transporter membrane protein | DFO49_0262 | Not Available | Negative | 281508 - 282641 | 39417.9 |
| xylose abc transporter atp-binding protein | DFO49_0263 | Not Available | Negative | 282724 - 284280 | 56252.8 |
| xylose-binding protein | DFO49_0264 | Not Available | Negative | 284389 - 285405 | 36729.4 |
| arac family transcriptional regulator | DFO49_0265 | Not Available | Positive | 285730 - 286995 | 46606.9 |
| aldose 1-epimerase | DFO49_0266 | Not Available | Positive | 286992 - 288056 | 39186.8 |
| hypothetical protein | DFO49_0267 | Not Available | Positive | 288300 - 288728 | 16773.1 |
| uncharacterized protein duf2442 | DFO49_0268 | Not Available | Positive | 288725 - 289174 | 16095.4 |
| isoquinoline 1-oxidoreductase alpha subunit | DFO49_0269 | Not Available | Positive | 289423 - 290037 | 20766.2 |
| isoquinoline 1-oxidoreductase beta subunit | DFO49_0270 | Not Available | Positive | 290034 - 292286 | 81338.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


