Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yoak (upf0700 family) | DFO49_0251 | Not Available | Positive | 262098 - 262799 | 24370.5 |
| putative membrane protein | DFO49_0252 | Not Available | Positive | 262796 - 263371 | 21044.2 |
| had superfamily hydrolase (tigr01509 family) | DFO49_0253 | Not Available | Negative | 263382 - 264110 | 26131.2 |
| hypothetical protein | DFO49_0254 | Not Available | Positive | 264425 - 265522 | 37281.2 |
| hypothetical protein | DFO49_0255 | Not Available | Negative | 265747 - 272991 | 247578.0 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DFO49_0256 | Not Available | Negative | 273560 - 274861 | 47721.7 |
| murein-dd-endopeptidase | DFO49_0257 | Not Available | Positive | 275114 - 276289 | 42128.9 |
| diguanylate cyclase (ggdef)-like protein | DFO49_0258 | Not Available | Negative | 276270 - 277775 | 56574.4 |
| l-fuconolactonase | DFO49_0259 | Not Available | Negative | 277894 - 278820 | 35564.0 |
| d-xylonate dehydratase | DFO49_0260 | Not Available | Negative | 278822 - 280606 | 64555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


