Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis sensory transducer | DFO49_3106 | Not Available | Positive | 3406706 - 3408415 | 61846.8 |
| Phage baseplate assembly protein | DFO49_3107 | Not Available | Positive | 3408516 - 3409169 | 22533.9 |
| Tail protein | DFO49_3108 | Not Available | Positive | 3409166 - 3409510 | 12452.1 |
| Baseplate assembly protein | DFO49_3109 | Not Available | Positive | 3409507 - 3410430 | 32717.8 |
| Phage tail protein gpi | DFO49_3110 | Not Available | Positive | 3410423 - 3411043 | 22875.6 |
| Tail protein | DFO49_3111 | Not Available | Positive | 3411040 - 3412272 | 42779.1 |
| hypothetical protein | DFO49_3112 | Not Available | Positive | 3412275 - 3412553 | 10267.0 |
| Tail sheath protein | DFO49_3113 | Not Available | Positive | 3412579 - 3413754 | 42159.3 |
| Phage major tail tube protein | DFO49_3114 | Not Available | Positive | 3413812 - 3414321 | 18542.2 |
| Tail assembly protein | DFO49_3115 | Not Available | Positive | 3414382 - 3414705 | 11527.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


