Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0231 | Not Available | Negative | 246483 - 246641 | 5884.47 |
| 3-hydroxyacyl-coa dehydrogenase | DFO49_0232 | Not Available | Positive | 246820 - 247791 | 34259.3 |
| dna-binding transcriptional lysr family regulator | DFO49_0233 | Not Available | Negative | 248033 - 248944 | 34096.1 |
| putative membrane protein | DFO49_0234 | Not Available | Positive | 249087 - 249536 | 16570.2 |
| hypothetical protein | DFO49_0235 | Not Available | Positive | 249562 - 250128 | 20667.7 |
| paib family negative transcriptional regulator | DFO49_0236 | Not Available | Positive | 250174 - 250812 | 23427.7 |
| helix-turn-helix protein | DFO49_0237 | Not Available | Positive | 250924 - 251826 | 33491.8 |
| pas domain s-box-containing protein | DFO49_0238 | Not Available | Negative | 251839 - 253395 | 56901.3 |
| response regulator receiver domain-containing protein | DFO49_0239 | Not Available | Negative | 253461 - 253856 | 13911.9 |
| xapx domain-containing protein | DFO49_0240 | Not Available | Negative | 253875 - 254117 | 8581.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


