Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | DFO49_0221 | Not Available | Positive | 232966 - 234714 | 61787.4 |
| methyl-accepting chemotaxis protein | DFO49_0222 | Not Available | Positive | 234916 - 236676 | 61693.5 |
| two-component system sensor histidine kinase tcte | DFO49_0223 | Not Available | Negative | 236691 - 238148 | 53205.7 |
| winged helix family two component transcriptional regulator | DFO49_0224 | Not Available | Negative | 238148 - 238822 | 24919.3 |
| putative tricarboxylic transport membrane protein | DFO49_0225 | Not Available | Positive | 239105 - 240085 | 35367.8 |
| iron(iii) transport system substrate-binding protein | DFO49_0226 | Not Available | Positive | 240165 - 241271 | 40196.2 |
| iron(iii) transport system permease protein | DFO49_0227 | Not Available | Positive | 241465 - 243276 | 65659.0 |
| iron(iii) transport system atp-binding protein | DFO49_0228 | Not Available | Positive | 243350 - 244438 | 39472.5 |
| putative porin | DFO49_0229 | Not Available | Positive | 244658 - 245728 | 38135.7 |
| hypothetical protein | DFO49_0230 | Not Available | Negative | 245841 - 246470 | 22366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


