Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | DFO49_0189 | Not Available | Negative | 200160 - 201251 | 39904.2 |
| peptide/nickel transport system permease protein | DFO49_0190 | Not Available | Negative | 201248 - 202150 | 31432.0 |
| peptide/nickel transport system permease protein | DFO49_0191 | Not Available | Negative | 202152 - 203105 | 34557.1 |
| abc-type transport system substrate-binding protein | DFO49_0192 | Not Available | Negative | 203263 - 204915 | 60428.4 |
| gntr family transcriptional regulator | DFO49_0193 | Not Available | Negative | 205007 - 205702 | 24636.5 |
| dha1 family bicyclomycin/chloramphenicol resistance-like mfs transporter | DFO49_0194 | Not Available | Negative | 205997 - 207220 | 43530.9 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | DFO49_0195 | Not Available | Positive | 207692 - 209026 | 47636.0 |
| diguanylate cyclase (ggdef)-like protein | DFO49_0196 | Not Available | Positive | 209040 - 210761 | 63640.0 |
| hypothetical protein | DFO49_0197 | Not Available | Positive | 210922 - 211749 | 32606.9 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFO49_0198 | Not Available | Positive | 212185 - 213438 | 45514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


