Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | DFO49_0137 | Not Available | Positive | 146375 - 147418 | 36947.0 |
| rod shape-determining protein mrec | DFO49_0138 | Not Available | Positive | 147745 - 148824 | 38886.0 |
| rod shape-determining protein mred | DFO49_0139 | Not Available | Positive | 148821 - 149330 | 19103.1 |
| penicillin-binding protein 2 | DFO49_0140 | Not Available | Positive | 149350 - 151323 | 72948.8 |
| cell elongation-specific peptidoglycan biosynthesis regulator roda | DFO49_0141 | Not Available | Positive | 151364 - 152473 | 40473.5 |
| rare lipoprotein a | DFO49_0142 | Not Available | Positive | 152648 - 153856 | 41864.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | DFO49_0143 | Not Available | Negative | 154001 - 154915 | 32780.2 |
| hypothetical protein | DFO49_0144 | Not Available | Positive | 154929 - 156194 | 44773.4 |
| putative endonuclease | DFO49_0145 | Not Available | Positive | 156202 - 156570 | 13320.0 |
| d-sedoheptulose 7-phosphate isomerase | DFO49_0146 | Not Available | Positive | 156694 - 157290 | 21073.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


