Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_0117 | Not Available | Negative | 122139 - 122555 | 15733.1 |
| rimj/riml family protein n-acetyltransferase | DFO49_0118 | Not Available | Negative | 122668 - 124188 | 56828.9 |
| dna-binding transcriptional lysr family regulator | DFO49_0119 | Not Available | Negative | 124189 - 125124 | 34033.6 |
| drug/metabolite transporter (dmt)-like permease | DFO49_0120 | Not Available | Positive | 125218 - 126150 | 33389.2 |
| gntr family transcriptional regulator | DFO49_0121 | Not Available | Negative | 126157 - 127575 | 51943.6 |
| beta-alanine--pyruvate transaminase | DFO49_0122 | Not Available | Positive | 127912 - 129240 | 47361.8 |
| malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | DFO49_0123 | Not Available | Positive | 129258 - 130769 | 53790.1 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | DFO49_0124 | Not Available | Positive | 131344 - 132537 | 43210.0 |
| amino acid/amide abc transporter membrane protein 1 (haat family) | DFO49_0125 | Not Available | Positive | 132618 - 133484 | 30757.7 |
| amino acid/amide abc transporter membrane protein 2 (haat family) | DFO49_0126 | Not Available | Positive | 133537 - 134535 | 35498.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


