Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit b | DFO49_0107 | Not Available | Negative | 113120 - 113770 | 22683.6 |
| 3-oxoacid coa-transferase subunit a | DFO49_0108 | Not Available | Negative | 113784 - 114479 | 24853.9 |
| pas domain s-box-containing protein | DFO49_0109 | Not Available | Positive | 114749 - 115309 | 21180.6 |
| lysr family transcriptional regulator | DFO49_0110 | Not Available | Negative | 115320 - 116258 | 34357.0 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | DFO49_0111 | Not Available | Positive | 116384 - 117280 | 32038.9 |
| hypothetical protein | DFO49_0112 | Not Available | Positive | 117339 - 117950 | 21313.5 |
| putative protein-disulfide isomerase | DFO49_0113 | Not Available | Positive | 118027 - 118758 | 26300.1 |
| methyl-accepting chemotaxis protein | DFO49_0114 | Not Available | Positive | 119249 - 120817 | 55010.9 |
| hypothetical protein | DFO49_0115 | Not Available | Negative | 120890 - 121435 | 21095.3 |
| 2-haloacid dehalogenase | DFO49_0116 | Not Available | Negative | 121456 - 122103 | 24574.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


