Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uronate dehydrogenase | DFO49_0077 | Not Available | Negative | 76890 - 77744 | 30956.5 |
| multidrug efflux system outer membrane protein | DFO49_0078 | Not Available | Negative | 78157 - 79659 | 53233.6 |
| hae1 family hydrophobic/amphiphilic exporter-1/multidrug efflux pump | DFO49_0079 | Not Available | Negative | 79659 - 82814 | 112715.0 |
| membrane fusion protein (multidrug efflux system) | DFO49_0080 | Not Available | Negative | 82826 - 84151 | 46465.3 |
| two-component system sensor histidine kinase baes | DFO49_0081 | Not Available | Positive | 84342 - 85796 | 53796.7 |
| two-component system response regulator baer | DFO49_0082 | Not Available | Positive | 85793 - 86536 | 27704.2 |
| methyl-accepting chemotaxis protein | DFO49_0083 | Not Available | Negative | 86664 - 88214 | 55136.5 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | DFO49_0084 | Not Available | Negative | 88394 - 89872 | 52987.8 |
| rnd family efflux transporter mfp subunit | DFO49_0085 | Not Available | Negative | 89869 - 91092 | 43894.7 |
| czca family heavy metal efflux pump | DFO49_0086 | Not Available | Negative | 91096 - 94284 | 113338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


