Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| res domain-containing protein | DFO49_0067 | Not Available | Negative | 68038 - 68553 | 18838.6 |
| hypothetical protein | DFO49_0068 | Not Available | Negative | 68550 - 69029 | 17329.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DFO49_0069 | Not Available | Positive | 69387 - 70274 | 31857.7 |
| glutathione s-transferase | DFO49_0070 | Not Available | Positive | 70299 - 70940 | 23670.3 |
| acs family hexuronate transporter-like mfs transporter | DFO49_0071 | Not Available | Negative | 71035 - 72291 | 45814.7 |
| dna-binding fadr family transcriptional regulator | DFO49_0072 | Not Available | Positive | 72740 - 73462 | 26463.5 |
| polar amino acid transport system substrate-binding protein | DFO49_0073 | Not Available | Negative | 73527 - 74330 | 29014.0 |
| amino acid abc transporter atp-binding protein (paat family) | DFO49_0074 | Not Available | Negative | 74363 - 75175 | 29488.7 |
| amino acid abc transporter membrane protein 2 (paat family) | DFO49_0075 | Not Available | Negative | 75159 - 75812 | 24358.8 |
| amino acid abc transporter membrane protein 1 (paat family) | DFO49_0076 | Not Available | Negative | 75809 - 76642 | 30079.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


